Organism mappings

organism_mappings

Format

An object of class tbl_df (inherits from tbl, data.frame) with 9 rows and 6 columns.

Examples

data(organism_mappings) organism_mappings
#> # A tibble: 9 x 6 #> organism nickname idGrep ensemblGrep ucscGrep organismGrep #> <chr> <chr> <chr> <chr> <chr> <chr> #> 1 Caenorhabd… roundworm WBGene[[:… WBcel[[:digit:]]… ce[[:dig… C(aenorhabditis)… #> 2 Danio rerio zebrafish ENSDAR(G|… GRCz[[:digit:]]+ danRer[[… D(anio)?([._[:sp… #> 3 Drosophila… fruitfly FB(gn|tr)… BDGP[[:digit:]]+ dm[[:dig… D(rosophila)?([.… #> 4 Gallus gal… chicken ENSGAL(G|… Gallus_gallus-[[… galGal[[… G(allus)?([._[:s… #> 5 Homo sapie… human ENS(G|T)[… GRCh[[:digit:]]{… hg[[:dig… H(omo)?([._[:spa… #> 6 Mus muscul… mouse ENSMUS(G|… GRCm[[:digit:]]{… mm[[:dig… M(us)?([._[:spac… #> 7 Ovis aries sheep ENSOAR(G|… Oar_v[[:graph:]]+ oviAri[[… O(vis)?([._[:spa… #> 8 Rattus nor… rat ENSRNO(G|… Rnor_[[:graph:]]+ rn[[:dig… R(attus)?([._[:s… #> 9 Saccharomy… yeast NA R[[:digit:]]{2}-… sacCer[[… S(accharomyces)?…